research library browse by date
The collection includes articles from PSI research groups and the broader community
January 2011
High-resolution structure of the nitrile reductase QueF combined with molecular simulations provide insight into enzyme mechanism
Kim Y., Zhou M., Moy S., Morales J., Cunningham M. et al.
J Mol Biol 404, 127 - 137 (2010)
The JCSG high-throughput structural biology pipeline
Elsliger M., Deacon A., Godzik A., Lesley S., Wooley J. et al.
Acta Cryst F 66, 1137 - 1142 (2010)
TOPSAN: use of a collaborative environment for annotating, analyzing and disseminating data on JCSG and PSI structures
Krishna S., Weekes D., Bakolitsa C., Elsliger M., Wilson I. et al.
Acta Cryst F 66, 1143 - 1147 (2010)
DUFs: families in search of function
Bateman A., Coggill P. and Finn R.
Acta Cryst F 66, 1148 - 1152 (2010)
Structure of the first representative of Pfam family PF09410 (DUF2006) reveals a structural signature of the calycin superfamily that suggests a role in lipid metabolism
Chiu H., Bakolitsa C., Skerra A., Lomize A., Carlton D. et al.
Acta Cryst F 66, 1153 - 1159 (2010)
The structure of SSO2064, the first representative of Pfam family PF01796, reveals a novel two-domain zinc-ribbon OB-fold architecture with a potential acyl-CoA-binding role
Krishna S., Aravind L., Bakolitsa C., Caruthers J., Carlton D. et al.
Acta Cryst F 66, 1160 - 1166 (2010)
Structure of the first representative of Pfam family PF04016 (DUF364) reveals enolase and Rossmann-like folds that combine to form a unique active site with a possible role in heavy-metal chelation
Miller M., Aravind L., Bakolitsa C., Rife C., Carlton D. et al.
Acta Cryst F 66, 1167 - 1173 (2010)
The structure of the first representative of Pfam family PF09836 reveals a two-domain organization and suggests involvement in transcriptional regulation
Das D., Grishin N., Kumar A., Carlton D., Bakolitsa C. et al.
Acta Cryst F 66, 1174 - 1181 (2010)
Structures of the first representatives of Pfam family PF06684 (DUF1185) reveal a novel variant of the Bacillus chorismate mutase fold and suggest a role in amino-acid metabolism
Bakolitsa C., Kumar A., Jin K., McMullan D., Krishna S. et al.
Acta Cryst F 66, 1182 - 1189 (2010)
Structural classification of proteins and structural genomics: new insights into protein folding and evolution
Andreeva A. and Murzin A.
Acta Cryst F 66, 1190 - 1197 (2010)
The structure of Jann_2411 (DUF1470) from Jannaschia sp. at 1.45 Å resolution reveals a new fold (the ABATE domain) and suggests its possible role as a transcription regulator
Bakolitsa C., Bateman A., Jin K., McMullan D., Krishna S. et al.
Structure of LP2179, the first representative of Pfam family PF08866, suggests a new fold with a role in amino-acid metabolism
Bakolitsa C., Kumar A., Carlton D., Miller M., Krishna S. et al.
The structure of the first representative of Pfam family PF06475 reveals a new fold with possible involvement in glycolipid metabolism
Bakolitsa C., Kumar A., McMullan D., Krishna S., Miller M. et al.
Structures of the first representatives of Pfam family PF06938 (DUF1285) reveal a new fold with repeated structural motifs and possible involvement in signal transduction
Han G., Bakolitsa C., Miller M., Kumar A., Carlton D. et al.
New variants of known folds: do they bring new biology?
Koonin E.
Acta Cryst F 66, 1226 - 1229 (2010)
Structure of an essential bacterial protein YeaZ (TM0874) from Thermotoga maritima at 2.5 Å resolution
Xu Q., McMullan D., Jaroszewski L., Krishna S., Elsliger M. et al.
Acta Cryst F 66, 1230 - 1236 (2010)
Structure of a putative NTP pyrophosphohydrolase: YP_001813558.1 from Exiguobacterium sibiricum 255-15
Han G., Elsliger M., Yeates T., Xu Q., Murzin A. et al.
Acta Cryst F 66, 1237 - 1244 (2010)
Open and closed conformations of two SpoIIAA-like proteins (YP_749275.1 and YP_001095227.1) provide insights into membrane association and ligand binding
Kumar A., Lomize A., Jin K., Carlton D., Miller M. et al.
Acta Cryst F 66, 1245 - 1253 (2010)
The structure of KPN03535 (gi|152972051), a novel putative lipoprotein from Klebsiella pneumoniae, reveals an OB-fold
Das D., Kozbial P., Han G., Carlton D., Jaroszewski L. et al.
Acta Cryst F 66, 1254 - 1260 (2010)
Viewing the human microbiome through three-dimensional glasses: integsrating structural and functional studies to better define the properties of myriad carbohydrate-active enzymes
Turnbaugh P., Henrissat B. and Gordon J.
Acta Cryst F 66, 1261 - 1264 (2010)
The structure of BVU2987 from Bacteroides vulgatus reveals a superfamily of bacterial periplasmic proteins with possible inhibitory function
Das D., Finn R., Carlton D., Miller M., Abdubek P. et al.
Acta Cryst F 66, 1265 - 1273 (2010)
Structure of BT_3984, a member of the SusD/RagB family of nutrient-binding molecules
Bakolitsa C., Xu Q., Rife C., Abdubek P., Astakhova T. et al.
Acta Cryst F 66, 1274 - 1280 (2010)
A conserved fold for fimbrial components revealed by the crystal structure of a putative fimbrial assembly protein (BT1062) from Bacteroides thetaiotaomicron at 2.2 Å resolution
Xu Q., Abdubek P., Astakhova T., Axelrod H., Bakolitsa C. et al.
Acta Cryst F 66, 1281 - 1286 (2010)
Structure of Bacteroides thetaiotaomicron BT2081 at 2.05 Å resolution: the first structural representative of a new protein family that may play a role in carbohydrate metabolism
Yeh A., Abdubek P., Astakhova T., Axelrod H., Bakolitsa C. et al.
Acta Cryst F 66, 1287 - 1296 (2010)
Structure of a membrane-attack complex/perforin (MACPF) family protein from the human gut symbiont Bacteroides thetaiotaomicron
Xu Q., Abdubek P., Astakhova T., Axelrod H., Bakolitsa C. et al.
Acta Cryst F 66, 1297 - 1305 (2010)
Ligands in crystal structures that aid in functional characterization
Speers A. and Cravatt B.
Acta Cryst F 66, 1306 - 1308 (2010)
Ligands in PSI structures
Kumar A., Chiu H., Axelrod H., Morse A., Elsliger M. et al.
Acta Cryst F 66, 1309 - 1316 (2010)
The structure of Haemophilus influenzaeprephenate dehydrogenase suggests unique features of bifunctional TyrA enzymes
Chiu H., Abdubek P., Astakhova T., Axelrod H., Carlton D. et al.
Acta Cryst F 66, 1317 - 1325 (2010)
Structure of a tryptophanyl-tRNA synthetase containing an iron-sulfur cluster
Han G., Yang X., McMullan D., Chong Y., Krishna S. et al.
Acta Cryst F 66, 1326 - 1334 (2010)
Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved α+β core domain and an auxiliary C-terminal treble-clef zinc finger
Axelrod H., Das D., Abdubek P., Astakhova T., Bakolitsa C. et al.
Acta Cryst F 66, 1335 - 1346 (2010)
Conformational changes associated with the binding of zinc acetate at the putative active site of XcTcmJ, a cupin from Xanthomonas campestris pv. campestris
Axelrod H., Kozbial P., McMullan D., Krishna S., Miller M. et al.
Acta Cryst F 66, 1347 - 1353 (2010)
Structure of the γ-
D -glutamyl-L -diamino acid endopeptidase YkfC from Bacillus cereus in complex withL -Ala-γ-D -Glu: insights into substrate recognition by NlpC/P60 cysteine peptidasesXu Q., Abdubek P., Astakhova T., Axelrod H., Bakolitsa C. et al.
Acta Cryst F 66, 1354 - 1364 (2010)
NMR in a crystallography-based high-throughput protein structure-determination environment
Wüthrich K.
Acta Cryst F 66, 1365 - 1366 (2010)
NMR structure of the protein NP_247299.1: comparison with the crystal structure
Jaudzems K., Geralt M., Serrano P., Mohanty B., Horst R. et al.
Acta Cryst F 66, 1367 - 1380 (2010)
Comparison of NMR and crystal structures for the proteins TM1112 and TM1367
Mohanty B., Serrano P., Pedrini B., Jaudzems K., Geralt M. et al.
Acta Cryst F 66, 1381 - 1392 (2010)
Comparison of NMR and crystal structures highlights conformational isomerism in protein active sites
Serrano P., Pedrini B., Geralt M., Jaudzems K., Mohanty B. et al.
Acta Cryst F 66, 1393 - 1405 (2010)
Maltose–neopentyl glycol (MNG) amphiphiles for solubilization, stabilization and crystallization of membrane proteins
Chae P., Rasmussen S., Rana R., Gotfryd K., Chandra R. et al.
Nature Methods 7, 1003 (2010)
The RNA structurome: high-throughput probing
Westhof E.
Nature Methods 7, 965 - 967 (2010)
Following the fold
Doerr A.
Nature Methods 7, 950 (2010)
Crystal Structure of the Eukaryotic Ribosome
Ben-Shem A., Jenner L., Yusupova G. and Yusupov M.
Science 330, 1203 - 1209 (2010)
Crystal Structures of RNase H2 in Complex with Nucleic Acid Reveal the Mechanism of RNA-DNA Junction Recognition and Cleavage
Rychlik M., Chon H., Cerritelli S., Klimek P., Crouch R. et al.
Molecular Cell 40, 658 - 670 (2010)
N. meningitidis 1681 is a member of the FinO family of RNA chaperones
Chaulk S., Lu J., Tan K., Arthur D., Edwards R. et al.
RNA biol 7, 112 - 119 (2010)
[http://www.landesbioscience.com/journals/rnabiology/article/13688]
