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The collection includes articles from PSI research groups and the broader community

November 2010

  • Structural Basis for Substrate Placement by an Archaeal Box C/D Ribonucleoprotein Particle

    Xue S., Wang R., Yang F., Terns R., Terns M. et al.

    Molecular Cell 39, 939 - 949 (2010)

    [doi: http://dx.doi.org/10.1016/j.molcel.2010.08.022]

  • Novel α-glucosidase from human gut microbiome: substrate specificities and their switch

    Tan K., Tesar C., Wilton R., Keigher L., Babnigg G. et al.

    FASEB J 24, 3939 - 3949 (2010)

    [doi: http://dx.doi.org/10.1096/fj.10-156257]

  • Engineering of a wheat germ expression system to provide compatibility with a high throughput pET-based cloning platform

    Zhao L., Zhao K., Hurst R., Slater M., Acton T. et al.

    J Struc Funct Genomics 11, 201 - 209 (2010)

    [doi: http://dx.doi.org/10.1007/s10969-010-9093-8]

  • Expansion of the protein repertoire in newly explored environments: human gut microbiome specific protein families

    Ellrott K., Jaroszewski L., Li W., Wooley J. and Godzik A.

    PLoS Comp Biol 6, e1000798 (2010)

    [doi: http://dx.doi.org/10.1371/journal.pcbi.1000798]

  • SARS coronavirus unique domain: three-domain molecular architecture in solution and RNA binding

    Johnson M., Chatterjee A., Neuman B. and Wüthrich K.

    J Mol Biol 400, 724 - 742 (2010)

    [doi: http://dx.doi.org/10.1016/j.jmb.2010.05.027]

  • TM0486 from the hyperthermophilic anaerobe Thermotoga maritima is a thiamin-binding protein involved in response of the cell to oxidative conditions

    Dermoun Z., Foulon A., Miller M., Harrington D., Deacon A. et al.

    J Mol Biol 400, 463 - 476 (2010)

    [doi: http://dx.doi.org/10.1016/j.jmb.2010.05.014]

  • Structural basis of O6-alkylguanine recognition by a bacterial alkyltransferase-like DNA repair protein

    Aramini J., Tubbs J., Kanugula S., Rossi P., Ertekin A. et al.

    J Biol Chem 285, 13736 - 13741 (2010)

    [doi: http://dx.doi.org/10.1074/jbc.M109.093591]

  • Solution NMR structure of Lin0431 protein from Listeria innocua reveals high structural similarity with domain II of bacterial transcription antitermination protein NusG

    Tang Y., Xiao R., Ciccosanti C., Janjua H., Lee D. et al.

    Proteins 78, 2563 - 2568 (2010)

    [doi: http://dx.doi.org/10.1002/prot.22760]

  • High-throughput expression and purification of membrane proteins

    Mancia F. and Love J.

    J Struc Biol 172, 85 - 93 (2010)

    [doi: http://dx.doi.org/10.1016/j.jsb.2010.03.021]

  • The New York Consortium on Membrane Protein Structure (NYCOMPS): a high-throughput platform for structural genomics of integral membrane proteins

    Love J., Mancia F., Shapiro L., Punta M., Rost B. et al.

    J Struc Funct Genomics 11, 191 - 199 (2010)

    [doi: http://dx.doi.org/10.1007/s10969-010-9094-7]

  • To automate or not to automate: this is the question

    Cymborowski M., Klimecka M., Chruszcz M., Zimmerman M., Shumilin I. et al.

    J Struc Funct Genomics 11, 211 - 221 (2010)

    [doi: http://dx.doi.org/10.1007/s10969-010-9092-9]

  • NMR method for measuring carbon-13 isotopic enrichment of metabolites in complex solutions

    Lewis I., Karsten R., Norton M., Tonelli M., Westler W. et al.

    Anal Chem 82, 4558 - 4563 (2010)

    [doi: http://dx.doi.org/10.1021/ac100565b]

  • Structure and activity of the metal-independent fructose-1,6-bisphosphatase YK23 from Saccharomyces cerevisiae

    Kuznetsova E., Xu L., Singer A., Brown G., Dong A. et al.

    J Biol Chem 285, 21049 - 21059 (2010)

    [doi: http://dx.doi.org/10.1074/jbc.M110.118315]

  • Discovery and structure determination of the orphan enzyme isoxanthopterin deaminase

    Hall R., Agarwal R., Hitchcock D., Sauder J., Burley S. et al.

    Biochemistry 49, 4374 - 4382 (2010)

    [doi: http://dx.doi.org/10.1021/bi100252s]

  • Structures of the autoproteolytic domain from the Saccharomyces cerevisiae nuclear pore complex component, Nup145

    Sampathkumar P., Ozyurt S., Do J., Bain K., Dickey M. et al.

    Proteins 78, 1992 - 1998 (2010)

    [doi: http://dx.doi.org/10.1002/prot.22707]

  • Crystal structure of an eIF4G-like protein from Danio rerio

    Bae E., Bitto E., Bingman C., McCoy J., Wesenberg G. et al.

    Proteins 78, 1803 - 1806 (2010)

    [doi: http://dx.doi.org/10.1002/prot.22703]

  • Rapid, robotic, small-scale protein production for NMR screening and structure determination

    Jensen D., Woytovich C., Li M., Duvnjak P., Cassidy M. et al.

    Prot Sci 19, 570 - 578 (2010)

    [doi: http://dx.doi.org/10.1002/pro.335]

  • Structure of a virulence regulatory factor CvfB reveals a novel winged helix RNA binding module.

    Matsumoto Y., Xu Q., Miyazaki S., Kaito C., Farr C. et al.

    Structure 18, 537 - 547 (2010)

    [doi: http://dx.doi.org/10.1016/j.str.2010.02.007]

  • The 2009 pandemic H1N1 neuraminidase N1 lacks the 150-cavity in its active site

    Li Q., Qi J., Zhang W., Vavricka C., Shi Y. et al.

    Nat Struct Mol Biol 17, 1266 - 1268 (2010)

    [doi: http://dx.doi.org/10.1038/nsmb.1909]

  • A metazoan ortholog of SpoT hydrolyzes ppGpp and functions in starvation responses

    Sun D., Lee G., Lee J., Kim H., Rhee H. et al.

    Nat Struct Mol Biol 17, 1188 - 1194 (2010)

    [doi: http://dx.doi.org/10.1038/nsmb.1906]

  • Cooperative interaction of transcription termination factors with the RNA polymerase II C-terminal domain

    Lunde B., Reichow S., Kim M., Suh H., Leeper T. et al.

    Nat Struct Mol Biol 17, 1195 - 1201 (2010)

    [doi: http://dx.doi.org/10.1038/nsmb.1893]

  • Structural basis of substrate recognition and specificity in the N-end rule pathway

    Matta-Camacho E., Kozlov G., Li F. and Gehring K.

    Nat Struct Mol Biol 17, 1182 - 1187 (2010)

    [doi: http://dx.doi.org/10.1038/nsmb.1894]

  • Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases

    Choi W., Jeong B., Joo Y., Lee M., Kim J. et al.

    Nat Struct Mol Biol 17, 1175 - 1181 (2010)

    [doi: http://dx.doi.org/10.1038/nsmb.1907]

  • Structural basis of HIV-1 resistance to AZT by excision

    Tu X., Das K., Han Q., Bauman J., D A. et al.

    Nat Struct Mol Biol 17, 1202 - 1209 (2010)

    [doi: http://dx.doi.org/10.1038/nsmb.1908]

  • Structural basis for 16S ribosomal RNA cleavage by the cytotoxic domain of colicin E3

    Ng C., Lang K., Meenan N., Sharma A., Kelley A. et al.

    Nat Struct Mol Biol 17, 1241 - 1246 (2010)

    [doi: http://dx.doi.org/10.1038/nsmb.1896]

  • Structure of the Dom34-Hbs1 complex and implications for no-go decay

    Chen L., Muhlrad D., Hauryliuk V., Cheng Z., Lim M. et al.

    Nat Struct Mol Biol 17, 1233 - 1240 (2010)

    [doi: http://dx.doi.org/10.1038/nsmb.1922]

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